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ALL Methylation Supplementary Table 4-14

List of highly correlated Refseq genes with upregulated FDR<0.05 and hypomethylated FDR<0.05 in TCF3_B

RefSeq Genes Annotation Cytoband Max Pearson Corr Estimate P Max Pearson Corr Max Pearson Corr Affy Probe GEP FC GEP FDR GEP Common Rank Max Pearson Corr HELP Probe MET Delta MET FDR
NM_003037 SLAMF1 signaling lymphocytic activation molecule family member 1 chr1q22-q23 0.515135183 5.77E-10 206181_at -5.181021235 2.22E-16 18 / 12428 MSPI0406S00060099 -2.478337181 1.14E-13
NM_005245 FAT1 FAT tumor suppressor homolog 1 (Drosophila) chr4q35 0.490367057 4.86E-09 201579_at -13.30041003 1.09E-13 20 / 12428 MSPI0406S00254314 -1.447307052 0.028029308
NM_001888 CRYM crystallin, mu chr16p13.11-p12.3 0.444883265 1.60E-07 205489_at -4.430350646 3.93E-11 27 / 12428 MSPI0406S00748727 -3.34935375 6.00E-22
NM_004997 MYBPH myosin binding protein H chr1q32.1 0.43555387 3.09E-07 206304_at -3.129469987 1.03E-06 72 / 12428 MSPI0406S00069855 -2.941275947 4.41E-13
NM_005737 ARL4C ADP-ribosylation factor-like 4C chr2q37.1 0.329768535 0.000153074 202207_at -11.72798377 3.02E-23 5 / 12428 MSPI0406S00155756 -1.384510614 0.031665646
NM_001628 AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) chr7q35 0.325152875 0.000191529 201272_at -2.471363657 2.68E-06 87 / 12428 MSPI0406S00396812 -1.72329845 1.51E-07
NM_015462 NOL11 nucleolar protein 11 chr17q24.2 0.303241005 0.000529177 221970_s_at -1.397334206 0.008863925 716 / 12428 MSPI0406S00821660 -2.19969716 3.35E-07
NM_015045 WAPAL wings apart-like homolog (Drosophila) chr10q23.2 0.279461484 0.00146324 212267_at -2.452403751 0.000155081 190 / 12428 MSPI0406S00527148 -2.711520984 1.96E-14
NM_001014987 LAT /// SPNS1 linker for activation of T cells /// spinster homolog 1 (Drosophila) chr16p11.2 0.259632056 0.003201501 209881_s_at -2.562799392 0.000972057 311 / 12428 MSPI0406S00753214 -1.275600046 0.000436265
NM_016087 WNT16 wingless-type MMTV integration site family, member 16 chr7q31 0.247512468 0.005023293 221113_s_at -11.71279188 3.30E-18 10 / 12428 MSPI0406S00393149 -0.432687589 0.015860519
NM_001033028 CYFIP1 cytoplasmic FMR1 interacting protein 1 chr15q11 0.231369876 0.008864427 208923_at -3.371148774 1.51E-08 44 / 12428 MSPI0406S00699417 -0.939782235 0.00120719
NM_004040 RHOB ras homolog gene family, member B chr2p24 0.211949174 0.016748911 212099_at -2.796562496 0.005830312 608 / 12428 MSPI0406S00096450 -0.882580654 0.032016968
NM_002168 IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial chr15q26.1 0.207606403 0.01917813 210046_s_at -1.565267297 0.024559042 1152 / 12428 MSPI0406S00727463 -1.159387224 0.010951228