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Yan Lab: Publications

(*indicates corresponding author)


    2010

  • Bai YH, Zhang Y, Zhang JP, Mu QX, Zhang WD, Butch ER, Snyder SE, Yan B.* Repeated Carbon Nanotube Administrations in Male Mice Cause Reversible Testis Damage without Affecting Fertility. Nature Nanotechnology, Web Publication Date: August 8, 2010. (DOI:10.1038/NNANO.2010.153)

  • Luo M and Yan B.* Enantioselective Henry Reactions Catalyzed by Chiral N-Metal Complexes Containing R(+)/ S(-)--Ethylphenyl Amines. Tetrahedron Letters 2010, in press.

  • Yan B., Zhang B. Analytical Methods in Combinatorial Chemistry, Second Edition, CRC Press, Taylor & Francis Group. ISBN: 978-0-8493-1860-3. Publication Date: August 10, 2010.

  • Mahindroo N, Connelly MC, Punchihewa C, Yang L, Yan B and Fujii N. Amide Conjugates of Ketoprofen and Indole as Inhibitors of Gli1-Mediated Transcription in the Hedgehog Pathway. Bioorganic Medicinal Chemistry 18(13), 4801-4811, 2010.

  • Zhang Y, Bai Y, Yan B.* Functionalized Carbon Nanotubes for Potential Medicinal Applications. Drug Discovery Today, 15, 428-435, 2010.

  • Liu W, Wu Y, Wang C, Li HC, Wang T, Liao CY, Cui L, Zhou QF, Yan B & Jiang GB. Impact of Silver Nanoparticles on Human Cells: Effect of Particle Size. Nanotoxicology 4(3), 319-330, 2010.

  • Li LW, Mu QX, Zhang B, Yan B.* Analytical Strategies for Detecting Nanoparticle-Protein Interactions. Analyst 135(7), 1519-1530, 2010.

  • Zhou HY, Li X, Lemoff A, Zhang B, Yan B.* Structural Confirmation and Quantification of Individual Ligands from the Surface of Multi-Functionalized Gold Nanoparticles. Analyst 135(6), 1210-1213, 2010.

  • Mu QX, Yang L, Davis JC, Vankayala R, Hwang KC, Zhao JC, Yan B.* Biocompatibility of Polymer Grafted Core/Shell Iron/Carbon Nanoparticles. Biomaterials 31(19), 5083-5090, 2010.

  • Tu Y, Jeffries C, Ruan H, Nelson C, Smithson D, Shelat AA, Brown KM, Li X-C, Hester JP, Smillie T, Khan IA, Walker L, Guy K*, Yan B.* An Automated High-Throughput System to Fractionate Natural Products for Drug Discovery. J Nat Prod 73(4), 751-754, 2010. (Rated #1 most read article by ACS in the first month of publication).

  • Zhang Q, Zhou HY, Yan B. Reducing nanotube cytotoxicity using nano-combinatorial library approach, chapter in Balasubramanian, K. and Burghard, M., eds. Methods in Molecular Biology Series on Carbon Nanotubes, Humana Press, Inc. NJ, U.S.A., 95-108, 2010.

  • Mu QX, Zhai SM, Yan B. Real-time Monitoring of Cellular Responses to Carbon Nanotubes, chapter in Balasubramanian, K. and Burghard, M., eds. Methods in Molecular Biology Series on Carbon Nanotubes, Humana Press, Inc. NJ, U.S.A., 85-94, 2010.

  • Zhang Q, Zhou H, Zhai S, Yan B.* Natural Product-Inspired Synthesis of Thiazolidine and Thiazolidinone Compounds and Their Anticancer Activities. Current Pharmaceutical Design 17, 1826-1842, 2010.

  • Wang F, Jiao P, Qi M, Frezza M, Dou Q*, Yan B.* Turning Tumor-Promoting Copper into an Anti-Cancer Weapon via High-Throughput Chemistry. Current medicinal Chemistry 17(25), 2685-2698, 2010.

  • Su G, Yan B.* Nano-Combinatorial Chemistry Strategy for Nanotechnology Research. J Comb Chem 12(2), 215-221, 2010.

  • Zhai, S.M., Yang, L., Cui, Q.Z.C., Sun, Y., Dou, Q.P.*, Yan, B.* Tumor Cellular Proteasome Inhibition and Growth Suppression by 8-Hydroxylquinoline and Clioquinol Requires Their Capabilities to Bind Copper and Transport Copper into Cells. J Biological Inorganic Chemistry 15(2), 259-269, 2010.

  • Zhou, H.Y., Zhang, W., Yan, B.* Use Cyclohexylisocyanide and Methyl 2-Isocyanoacetate as Convertible Isocyanides for Microwave-Assisted Fluorous Synthesis of 1,4-Benzodiazepine-2,5-Dione Library. J Comb Chem 12(1), 206-214, 2010.

  • Zhang, B., Yan, B.* Analytical Strategies for Characterizing Nanoparticles Surface Chemistry. Anal Bioanal Chem, 396(3), 973-982, 2010.


  • 2009

  • Milacic, V., Jiao, P.F., Zhang, B., Yan, B.*, Dou, Q.P.* Novel 8-Hydroxylquinoline Analogs Induce Copper-Dependent Proteasome Inhibition and Cell Death in Human Breat Cancer Cells. International Journal of Oncology 35(6), 1481-1491, 2009.

  • Luo, M.* and Yan, B.* A Simple Synthesis of Octaphenylcyclotetra(Siloxane). Tetrahedron Letters 50(37), 5208-5209, 2009.

  • Mu, Q.X., Du, G.Q., Chen, T.S., Zhang, B., Yan, B.* Suppression of Human Bone Mophorgenetic Protein (BMP) Signaling by Carboxylated Single-Walled Carbon Nanotubes. ACS Nano 3(5), 1139-1144, 2009.

  • Zhang, B., Xing, Y.H., Zhou, H.Y., Li, Z.W., Mu, Q.X., Yan, B.* Functionalized Carbon Nanotubes Specifically Bind to Chymotrypsin Catalytic Site and Regulate its Enzymatic Function. Nano Letters 9(6), 2280-2284, 2009.

  • Zhang, Q., Feng, W., Zhou, H.Y., Yan, B.* Advances in Preclinical Small Molecules for the Treatment of Non-Small Cell Lung Cancer. Expert Opinion on Therapeutic Patents 19(6), 731-751, 2009.

  • Guangbo Qu, Yuhong Bai, Yi Zhang, Qing Jia, Weidong Zhang, Bing Yan*. The effect of multiwalled carbon nanotube agglomeration on their accumulation in and damage to organs in mice. Carbon, 47, 2060-2069, 2009.

  • Qingxin Mu, Zhenwei Li, Xi Li, Sanjay R. Mishra, Bin Zhang, Zhikun Si, Lei Yang, Wei Jiang, Bing Yan*. Characterization of Protein Clusters of Diverse Magnetic Nanoparticles and Their Dynamic Interactions with Human Cells. J. Phys. Chem. C. 113 (14), 5390–5395, 2009.

  • Ma, X.F., Shi, R.R., Zhang, B., Yan, B.* Kinetics of Resin-Supported Mitsunobu Esterification and Etherification Reactions. J Comb Chem. 11 (3) 438-445, 2009.

  • Du, F.F., Zhou, H.Y., Chen, L.X., Zhang, B., Yan, B.* Structure Elucidation of Nanoparticle-Bound Organic Molecules by 1H NMR. Trends in Anal. Chem. 28(1), 88-95, 2009.


  • 2008

  • Zhou, H.Y., Du, F.F., Li, X., Zhang, B., Li, W., Yan, B.* Characterization of Organic Molecules Attached to Gold Nanoparticle Surface Using High Resolution Magic Angle Spinning 1H NMR. J. Phys. Chem. C., 112 (49) 19360-19366, 2008.

  • Yu, Y.M., Zhang, Q., Mu, Q.X., Zhang, B., Yan, B.* Exploring the Immunotoxicity of Carbon Nanotubes. Nanoscale Research Letters 3, 271-277, 2008.

  • Lemoff, A. and Yan, B.* Dual Detection Approach to a More Accurate Measure of Relative Purity in High-Throughput Characterization of Compound Collections. J Comb Chem 10(5), 746-751, 2008.

  • Qi M, Zhou H, Ma X, Zhang B, Jefferies C, Yan B.* Feasibility of a Self-Calibrated LC/MS/UV Method to Determine the Absolute Amount of Compounds in Their Storage and Screening Lifecycle. J Comb Chem 10 (2), 162-165, 2008.

  • Zhou H, Mu Q, Gao N, Liu A, Xing Y, Gao S, Zhang Q, Qu G, Chen Y, Liu G, Zhang B, Yan B*. A Nano-Combinatorial Library Strategy for the Discovery of Nanotubes with Reduced Protein-Binding, Cytotoxicity, and Immune Response. Nano Lett 8(3), 859-865, 2008.

  • Zhou H, Wu S, Zhai S, Liu A, Sun Y, Li R, Zhang Y, Ekins S, Swaan PW, Fang B, Zhang B, Yan B*. Design, Synthesis, Cytoselective Toxicity, Structure-Activity Relationships, and Pharmacophore of Thiazolidinone Derivatives Targeting Drug-Resistant Lung Cancer Cells. J Med Chem 51, 1242-1251, 2008.

  • Mu Q, Liu W, Xing Y, Zhou H, Li Z, Zhang Y, Ji L, Wang F, Si Z, Zhang B, Yan B*. Protein Binding by Functionalized Multiwalled Carbon Nanotubes Is Governed by the Surface Chemistry of Both Parties and the Nanotube Diameter. J Phys Chem C 112(9), 3300-3307, 2008.

  • Zhang B, Li X, Yan B*. Advances in HPLC detector-towards universal detection. Anal Bioanal Chem 390(1), 299-301, 2008.
    Zhou H, Liu A, Li X, Ma X, Feng W, Zhang W, Yan B*. Microwave-Assisted Fluorous Synthesis of 2-Aryl-Substituted 4-Thiazolidinone and 4-Thiazinanone Libraries. J Comb Chem 10(2), 303-312, 2008.


  • 2007

  • Yu Z, Wang F, Milacic V, Li X, Cui QC, Zhang B, Yan B*,  Dou QP.* Evaluation of copper-dependent proteasome-inhibitory And apoptosis-inducing activities of novel Pyrrolidine dithiocarbamate analogues. Int J Mol Med 20: 919-925, 2007.

  • Xu P, Qiu JH, Zhang YN, Chen J, Wang PG, Yan B, Song J, Xi Ri M, Deng ZX, Ma CQ. Efficient whole-cell biocatalytic synthesis of N-acetyl-D-neuraminic acid. Adv Syn Cat 349(10), 1614-1618, 2007.

  • Chen D, Cui QC, Yang H, Barrea RA, Sarkar FH, Sheng S, Yan B, Reddy GPV, Dou QP. Cliquinol, a Therapeutic Agent for Alzheimer’s Disease, Has Proteasome-inhibitory, Apoptosis-inducing and Anti-tumor Activities in Human Prostate Cancer Cells and Xenografts. Cancer Res 67(4):1636-44, 2007.

  • Zhai S, Liu W, Yan B.*   Recent patents on treatment of severe acute respiratory syndrome (SARS). Recent Patents on Anti-Infective Drug Discovery 2(1), 1-10, 2007.

  • Chen L, Choo J, Yan B. The microfabricated electrokinetic pump: a potential promising drug delivery technique. Expert Opin Drug Deliv 4(2):119-129, 2007.

  • Yan B*, Shi R, Zhang B, Kshirsagar T. A Kinetic Study of Product Cleavage Reactions from the Solid Phase by a Biocompatible and Removable Cleaving Reagent, HCl. J Combi Chem 9(4), 684-689, 2007.

  • Yan B*, Zhao J, Leopold K, Zhang B, Jiang G. The Structure Dependent Response of Chemiluminescence Nitrogen Detector (CLND) for Organic Compounds with Adjacent Nitrogen Atoms Connected by a Single Bond. Anal Chem 79 (2) 718-726, 2007.


  • 2006

  • Landis-Piwowar KR, Milacic V, Chen D, Yang H, Zhao ZY, Chan TH, Yan B, Dou QP. Discovering novel anticancer drugs and chemo-sensitizers by using the proteasome as a potential target. Drug Resistance Update 9, 263-273, 2006.


  • 2005

  • Cheng X, Yan B, Gao L, Tang H, Fan Y, Anderson SN, Affleck R, Burns D. Compound transfer efficiency from polystyrene surfaces-application to microarrayed compound screening. J Biomolecular Screening 10(4), 293-303, 2005.


  • 2004

  • Irving M, Krueger CA, Wade JV, Hodges JC, Leopold K, Chan C, Shaqair S, Shornikov A, Stock M, Collins N, Yan B*. High-Throughput Purification of Combinatorial Libraries II: Automated Separation of Single Diastereomers from a 1920-Member 4-Amidopyrrolidinone Library. J Combi Chem 6, 478-486, 2004.

  • Yan B*, Collins N, Wheatley J, Irving M, Leopold K, Chan C, Shornikov A, Fang L, Lee A, Stock M, Zhao J. High-Throughput Purification of Combinatorial Libraries I: A High-Throughput Purification System Using an Accelerated Retention Window Approach. J Combi Chem 6, 255-261, 2004.


  • 2003

  • Yan B*, Fang L, Irving M, Zhang S, Boldi AM, Woolard F, Johnson CR, Kshirsagar T, Figliozzi GM, Krueger CA, Collins N. Quality Control in Combinatorial Chemistry: Determination of the Quantity, Purity, and Quantitative Purity of Compounds in Combinatorial Libraries. J Combi Chem 5(5), 547-559, 2003.


  • 2002

  • Yan B*. Single bead analysis in combinatorial chemistry. Current Opinion in Chemical Biology 6, 328-332, 2002.

  • Fang L, Demee M, Sierra T, Kshirsagar T, Celebi A, Yan B*. Kinetic Study of Amine Cleavage Reactions of Various Resin-Bound Thiophenol Esters from Marshall Linker. J Combi Chem 4, 362-368, 2002.

  • Cournoyer JJ, Kshirsagar T, Fantauzzi PP, Figliozzi GM, Makdessian T, Yan B*. A Color Test for the Detection of Resin-Bound Aldehyde in Solid-Phase Combinatorial Synthesis. J Combi Chem 4, 120-124, 2002.


  • 2001

  • Yan B*, Yan H. Combination of Single Bead FTIR and Chemometrics in Combinatorial Chemistry: Application of Multivariate Calibration Method in the Monitoring of Solid Phase Organic Synthesis. J Combi Chem 3, 78-84, 2001.


  • 2000

  • Yan B*, Nguyen N, Liu L, Holland G, Raju B. Kinetic Comparison of Trifluoroacetic Acid Cleavage Reactions of Resin-Bound Carbamates, Ureas, Secondary Amides, and Sulfonamides from Benzyl-, Benzhydryl-, and Indole-Based Linkers. J Comb Chem 2(1) 66-74, 2000.


  • 1999

  • Yan B*, Liu L, Astor CA, Tang Q. Determination of the Absolute Amount of Resin-Bound Hydroxyl or Carboxyl Groups for the Optimization of Solid-Phase Combinatorial and Parallel Organic Synthesis. Anal Chem 71(20) 4564-4571, 1999.

  • Yan B*, Martin PC, Lee J. Single Bead Fluorescence Microspectroscopy: Detection of Self-Quenching in Fluorescence-Labeled Resin Beads. J Combin Chem 1, 78-81, 1999.


  • 1998

  • Yan B*. Monitoring the progress and the yield of solid-phase organic reactions directly on resin supports. Acct Chem Res 31, 621-630, 1998.

  • Yan B*, Sun Q. Crucial factors regulating site-interactions in resin supports determined by single bead IR. J Org Chem 63, 55-58, 1998.


  • 1997

  • Yan B*, Li W. Rapid fluorescence determination of the absolute amount of aldehyde and ketone groups on resin supports. J Org Chem 62, 9354-9357, 1997.

  • Yan B, Spudich EN, Sheves M, Spudich JL. Complexation of the signal transducing protein HtrI to sensory rhodopsin I and its effect on thermodynamics of signaling state deactivation. J Phys Chem 101, 109-113, 1997.


  • 1996

  • Yan B*, Sun Q, Wareing JR, Jewell CF. Real-time Monitoring of the Catalytic Oxidation of Alcohols on Resin Supports by Single Bead FTIR Microspectroscopy. J Org Chem 61, 8765-8770, 1996.

  • Yan B*, Fell JB, Kumaravel G. Progression of organic reactions on resin supports monitored by single bead FTIR microspectroscopy. J Org Chem 61, 7467-7472, 1996.


  • 1995

  • Yan B*, Spudich JL, Mazur P, Vunnam S, Derguini F, Nakanishi K. Spectral tuning in bacteriorhodopsin in the absence of counterion and coplanarization effects. J Biol Chem 270, 29668-29670, 1995.

  • Yan B, Kumaravel G, Anjaria H, Wu A, Petter RC, Jewell CF, Wareing J. Infrared spectrum of a single resin bead for real-time monitoring of solid-phase reactions. J Org Chem 60, 5736-5738, 1995.


  • 1993

  • Yan B, Xie A, Nienhaus GU, Katsuta Y, Spudich JL. Steric constraints in the retinal binding pocket of sensory rhodopsin I. Biochemistry 32, 10224-10232, 1993.


  • 1991

  • Ratto GM, Robinson DW, Yan B, McNaughton PA. Development of the light response in neonatal mammalian rods. Nature 351, 654-657, 1991.

  • Yan B, Nakanishi K, Spudich JL. Mechanism of activation of sensory rhodopsin I: evidence for a steric trigger. Proc Natl Acad Sci USA 88, 9412-9416, 1991.

  • Yan B, Takahashi T, Johnson R, Spudich JL. Identification of signaling states of a sensory receptor by modulation of lifetimes of stimulus-induced conformations: the case of sensory rhodopsin II. Biochemistry 30, 10686-10692, 1991.