Table of Contents
Section I: Patient Dataset
  Diagnostic ALL samples used for class prediction
  Subgroup distribution of ALL cases

Section II: Methods
  Hybridization of microarrays
  Statistical methods

Section III: Genetic Subtype Discriminating Genes
  Top 100 chi-square probe sets selected for BCR-ABL decision tree format
  Top 100 chi-square probe sets selected for E2A-PBX1 decision tree format
  Top 100 chi-square probe sets selected for Hyperdiploid >50 decision tree format
  Top 100 chi-square probe sets selected for MLL decision tree format
  Top 100 chi-square probe sets selected for T-ALL decision tree format
  Top 100 chi-square probe sets selected for TEL-AML1 decision tree format
  Top 100 chi-square probe sets selected for BCR-ABL parallel format
  Top 100 chi-square probe sets selected for E2A-PBX1 parallel format
  Top 100 chi-square probe sets selected for Hyperdiploid >50 parallel format
  Top 100 chi-square probe sets selected for MLL parallel format
  Top 100 chi-square probe sets selected for T-ALL parallel format
  Top 100 chi-square probe sets selected for TEL-AML1 parallel format  

Section IV: Diagnostic Accuracy
  Training and test set results
  Cross comparison of supervised learning algorithms

Section V: Comparison of Expression Profiles and Reat-time PCR (Taqman)

Section VI: References